We maintain a number of interactive environments and applications to enable advanced end-users to analyze their own data. These include two RStudio interactive environments that we run on our HCI servers. The Rstudio logins are restricted; contact us for questions about access.

• Uinta, restricted to the HCI network
• Deadhorse, restricted to the university network

We also host a number of R Shiny applications on the Deadhorse server. These are available to anyone within the university network.

• Tools for collating and preparing gene count and sample tables for differential gene expression
• Interactive tool for running differential gene expression
• Tools for exploring KEGG network gene sets in your differentially expressed data
• Dashboard for summarizing studies in our Patient Molecular Repository.  

We also provide a cBioPortal server for exploring molecular and clinical data review. This server is restricted to the university network. See our cBioPortal page for more information.